Browse of TCMCG015C41301 protein

CDS

Accession Number	TCMCG015C41301
gbkey	CDS
Protein Id	XP_027074582.1
Location	complement(join(622241..622348,622350..622472,622629..622675,622678..622758,623470..623611,623613..623705,624447..624554,624647..624703,624794..624853,625057..625085,625088..625174,625177..625347,625468..625624,625708..625779,625782..626021,626151..626281,626361..626522,626525..626810,626813..626890,627366..627550,627553..627681,627684..627782,627785..628097,629320..629328))
Gene	LOC113698836
GeneID	113698836
Organism	Coffea arabica

Protein

Length	995aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027218781.1
Definition	LOW QUALITY PROTEIN: CRM-domain containing factor CFM2, chloroplastic-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	L
Description	Chloroplastic group IIA intron splicing facilitator CRS1
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000372        [VIEW IN EMBL-EBI] GO:0000373        [VIEW IN EMBL-EBI] GO:0000375        [VIEW IN EMBL-EBI] GO:0000376        [VIEW IN EMBL-EBI] GO:0000377        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009532        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044435        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGTTACTGTCCTGCTACTCCAAATGGCCCTATATACAGGCAACCATCAATTCTACTTACTTCCCCCGCCAAATCCAAACCCCTCCTTAACCCCTTTCTACCTTCCTCCGTCACCTTCCCAAACCCACCTACCACGTACGGCGTCTCTCCTCCGAAACCGCTCTTCTGCCGAGCCACCGCCACTGCCATTGCCACTGCCACTGGCGACACTGAAACTCTACCCCAATCCGCCATCCAAAGGATTGCCGAAAAGCTTCGCGGCCTCGGCTACGTCGAAGATGATAAGGATGAGAACAAAGATGAAGATAAGCTTCCAAAGAGGGCCTCGCCGGGCGAAATCTTTGTTCCGTTGCCTTCCCAGTTGCCGAAGTACCGGGTCGGGCACACTCTTGACCCGAGTTGGAGCACGCCCCAGAACCTCCCCTTACCCGGCTCGGGGAATGCGATTCAGAAGTATCACCAGTTGAGGAGGGGCGTGATTAAGGAGAGGATTGAGGAGAGGAAGAAAAGGGAGACAGTGCCCACCTTGGCGGAGCTCAATTTGCCGGGGGAGCTGAGGAGGCTGAGGACACTTGGTATTCGGTTGCAGAAGAAGTTGAAGGTTGGGAAGGCCGGGATCACGGAAGGGATTGTGAATGGGATTCACGAGAGGTGGAGGAGGTATGAGGTGGTCAAGATCAGGTGTGAGGATATCTGTAGGATGAATATGAAGAGGACTCATGAGTTGTTAGAGATGAAGACTGGAGGCTTAGTAGTTTGGAGATCTGGAACTAACATAGTGCTATACAGAGGAGCTGATTACAAGTACCCTTTCTTTTCTGATGATAATACAGCAAATGGCTCTTTGCGTGAAGAAGCTTCAGTTGATTTTCGGATGGATTACAGAGAGGATAATGAAAAGAAGGCTTCTTCATCTGGTGGGAATGCCCTGAGATCTTCTGTACCTAAGTCACTCAGCAAAGTGTCTCATCCACCTCTAATACAAGGTGTAGGAACTCCAAATAGAGTACGATTCCAACTGCCTGGTGAGGCACAACTTGCTGAAGAGGCTGATCGCCTGTTAGAAGGACTTGGTCCCCGGTTTACTGATTGGTGGGATGAACCTTTACCTGTTGATGCTGATTTTTTACCAGCAGCAGTTCCTGGATATAGGAGACCATTTCGTCTGCTTCCTTATGGAGTGAAACCTATATTAACAAATGATGAAATGACATTTTTACGGAGACTTGGTCGGCCTTTACCATGCCATTTTGCCCTAGGCAGAAATAGAAAACTTCAGGGCTTGGCTGCTGCAATTATTAAGCTATGGGAGAAATGTGAAATTGCCAAAATTGCTGTTAAAAGAGGAGTCCAGAACACCAACAGTGAATTGATGGCTGAGGAACTAAAGAACCTAACTGGGGGAACCTTGCTTTCAAGAGATAAGGAATTCATTGTCCTGTACAGAGGAAAGGATTTCTTGCCAGCTGCAGTCTCTTTAGCAATTGAAAAGCGGAGGAACTATGTGCTTGATGGTGAAGAAAAGGGAGCAGACAAAAGTTTTACTACAGTGAGCTCAAAAGACCAAAGGCTGGGGACCTCAGAAAATTGTAATGGAGATGAAAATAATGGTAAAGAGGACCAGAAACTTACTTGCTCCAAGCGAAGGCATCGAAGCTCAACAGAAGCAGCAATTGAGAGAACTAGTGCCAAATTATCCAAGGCACTAGTGAAGAAAGACATGGCAGAGAAGCTTCTTGTAGAGCTGGAGAAGGAAGAGACCACCCAAGAGCCAGAAGTTGATAAAGAAGGTATTACAGAAGAAGAACGATATATGCTGAGAAAAATTGGCTTGAGAATGAAACCTTTCCTGCTTCTGGGAAGACGAGGAGTATTTGATGGAACAATCGAAAATATGCATCTTCACTGGAAATACAGAGAATTAGTGAAGATTATAACCGGGGGAAGAAGTATTGAGGAGGTCACTGCAAGAGCACGAACACTGGAGGCAGAAAGTGGCGGAATTTTAGTAGCAGTTGAACGGGTTAGCAGTTTTGCTATCATTGTATATCGTGGAAAGAACTACAGTCGCCCTGCTTGTTTGAGGCCTCGTTCGCTTCTAAGCAAAAGAGAAGCAAAACGTTCTTTAGAGGCACAACGTCGTGAGTCTCTCAAATTACATGTTTTGAAGCTTACACAGAATATAGATCGGTTGAAGCTTCAATTGGCCAAAGAAAAGGGTACAAACAAGACGGACTTGGCTGAAGAATTAAAACTCAAATTGGACGAAGAGCAGGAGCCAGACAAGTTCCATTCATCAAAAAATAAAATGTCCCTTGCTAGTCCTGAACTCTCTCCCCAATCATTGTCAACGAGCCATTATAATGAACAGACACTTGGTGTGACACGCACTTCCGCTATTGGTACTATGGAGGCTAAACTTGGTGGCACCAAAGCTATGCATTCCCTGCTGATCCATGAAAACGAGCTAGATTCATCAGTTCATGTAGTTAAGGAAAGTGGCTGCAATGCAATACTTGTTAGAGCTAAAAGCCTCTCCAATAGAGACAGGCTACTTTTGCGGAAACAAGCGCTGAAGATGAAAAAGCATCATGTGTTTGCCATAGGGAAGAGCAACAAGGTTAGTGGACTTGCTGAAGCAATCAAGGTCCGCTTCCAAAAGTACCCTCTTGCTATAGTGAATGTAAGCAGAGCCAAAGGGACTTCTGTCCAGGAGGTGGTCTTCAAGCTGGAGCAAGCCACTGGGGCTGTGCTGGTGTCTCAAGAACCAAGTAAAGTCATACTGTATAGGGGTTGGGGAGCAGGAGAGCCAACTACCCATGGTAGCCGGGAAAGTACTACAGATTCGAGATACTTTTCAGGCAGAGAGGGTAGGACTCCGCATGCTATACCTCACGATCTTATGTCAGCGATCAGGCTTGAATGTGGTTTGCAGCCTTACAACGAGAAAGAATCCACTTCTTAG

Protein:   MCYCPATPNGPIYRQPSILLTSPAKSKPLLNPFLPSSVTFPNPPTTYGVSPPKPLFCRATATAIATATGDTETLPQSAIQRIAEKLRGLGYVEDDKDENKDEDKLPKNXASPGEIFVPLPSQLPKYRVGHTLDPSWSTPQNPXPLPGSGNAIQKYHQLRRGVIKERIEERKKRETVPTLAELNLPEXELRRLRTLGIRLQKKLKVGKAGITEGIVNGIHERWRRYEVVKIRCEDICRMNMKRTHELLEMKTGGLVVWRSGTNIVLYRGADYKYPFFSDDNTANGSLREEASVDFRMDYREDNEKKASSSGGNALRSSVPKSLSKVSHPPLIQGVGTPNRVRFQLPGEAQLAEEADRLLEGLGPRFTDWWGXEPLPVDADFLPAAVPGYRRPFRLLPYGVKPILTNDEMTFLRRLGRPLPCHFALGRNRKLQGLAAAIIKLWEKCEIAKIAVKRGVQNTNSELMAEELKNLTGGTLLSRDKEFIVLYRGKDFLPAAVSLAIEKRRNYVLDGEEKGADKSFTTVSSKDQRLGTSENCNGDENNGKEDQKLTCSKRRHRSSTEAAIERTSAKLSKALVKKDMAEKLLVELEKEETTQEPEVDKEGITEEERYMLRKIGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIITGGRSIEEVTARARTLEAESGGILVAVERVSKXFAIIVYRGKNYSRPACLRPRSLLSKREAMXRSLEAQRRESLKLHVLKLTQNIDRLKLQLAKEKGTNKTDLAEELKLKLDEEQEPDKFHSSKNKMSLASPELSPQSLSTSHYNEQTLGVTRTSAIGTMEAKLGGTKAMHSLLIHENELDSSVHVVKESGCNAILVRAKSLSNRDRLLLRKQALKMKKHHVFAIGKSNKVSGLAEAIKVRFQKYPLAIVNVKXRAKGTSVQEVVFKLEQATGAVLVSQEPSKVILYRGWGAGEPTTHGSRESTTDSRYFSGREGRTPHAIPHDLMSAIRLECGLQPYNEKESTS